MLOC_43410 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains43.178450.329350.140140.3907
LEAShoots from the seedlings (10 cm shoot stage)37.404725.812523.826522.2411
INF1Young developing inflorescences (5mm)35.926534.730635.651323.9191
INF2Developing inflorescences (1-1.5 cm)16.195719.50316.801115.8611
ROORoots from the seedlings (10 cm shoot stage)39.899649.630241.442547.7718
NODDeveloping tillers at six leaf stage, 3rd internode36.032330.635255.7492105.939
CAR5Developing grain, bracts removed (5 DPA)39.125139.124341.550630.8178
CAR15Developing grain, bracts removed (15 DPA)6.670885.795975.8146611.0526



CDS Structure of MLOC_43410






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_43410.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250480.1NoneNoneNoneNone
MLOC_43410.1CUST_226_PI427708083AvailableAvailablecontig_270148 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g45910.1 -2 0.0 603 329/375 (88%) 13101.m04713 protein plastidic ATP/ADP-transporter, putative, expressed
TAIR PP10 AT1G80300.1 -2 2e-160 486 264/373 (71%) | Symbols: NTT1, ATNTT1 | nucleotide transporter 1 | chr1:30191954-30194280 FORWARD LENGTH=624