MLOC_43406 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.351173.798363.081740
LEAShoots from the seedlings (10 cm shoot stage)6.178526.8020327.0830
INF1Young developing inflorescences (5mm)0.5725410.3487260.8588380
INF2Developing inflorescences (1-1.5 cm)0.09282660.7726590.6241210
ROORoots from the seedlings (10 cm shoot stage)5.311362.523592.763420
NODDeveloping tillers at six leaf stage, 3rd internode2.623633.898172.151460
CAR5Developing grain, bracts removed (5 DPA)0.4588311.670440.7558190
CAR15Developing grain, bracts removed (15 DPA)0.720480.3772380.3577880



CDS Structure of MLOC_43406






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374914
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374914CUST_22740_PI427708080NoneNoneNone
MLOC_43406.1NoneAvailableNonecontig_270106 (Not mapped)
MLOC_48176.1NoneAvailableNonecontig_318946 (Mapped)
MLOC_74066.1NoneAvailableAvailablecontig_65098 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----