MLOC_4339 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 87.8107 | 82.8454 | 91.2858 | 85.5739 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 134.454 | 136.358 | 111.772 | 106.774 |
| INF1 | Young developing inflorescences (5mm) | 9.51263 | 5.78859 | 7.54363 | 6.48231 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.73968 | 8.88858 | 6.33347 | 8.00499 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 45.7966 | 48.6021 | 39.1362 | 55.4267 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 47.0562 | 42.5536 | 91.2385 | 166.253 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 43.8505 | 55.0612 | 51.503 | 49.9103 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.70097 | 5.53058 | 5.52429 | 15.2448 |
CDS Structure of MLOC_4339
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4339.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g33100.1 |
+2 |
6e-145 |
416 |
201/240 (84%) |
13105.m03416 protein endo-1,3;1,4-beta-D-glucanase precursor, putative, expressed |
| TAIR PP10 |
AT3G23600.1 |
+2 |
3e-102 |
306 |
146/240 (61%) |
alpha/beta-Hydrolases superfamily protein | chr3:8473833-8475655 FORWARD LENGTH=239 |
