- Predicted Gene MLOC_43306
MLOC_43306 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_43306_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_43306_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.6393 | 25.5323 | 23.3757 | 24.811 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 27.9186 | 20.7872 | 18.5862 | 21.5314 |
INF1 | Young developing inflorescences (5mm) | 64.1713 | 57.9042 | 56.5265 | 55.5248 |
INF2 | Developing inflorescences (1-1.5 cm) | 108.578 | 87.9122 | 78.6039 | 109.73 |
ROO | Roots from the seedlings (10 cm shoot stage) | 11.556 | 24.6012 | 13.6239 | 32.1839 |
NOD | Developing tillers at six leaf stage, 3rd internode | 10.909 | 14.5315 | 16.3207 | 54.0104 |
CAR5 | Developing grain, bracts removed (5 DPA) | 41.5345 | 36.0758 | 38.7561 | 41.783 |
CAR15 | Developing grain, bracts removed (15 DPA) | 20.2685 | 18.6127 | 20.0339 | 48.7723 |
CDS Structure of MLOC_43306
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_43306.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g28090.1 |
+1 |
0.0 |
573 |
324/357 (91%) |
13104.m02658 protein MYB family transcription factor, putative, expressed |
TAIR PP10 |
AT1G09770.1 |
+1 |
4e-167 |
492 |
285/359 (79%) |
| Symbols: ATCDC5, CDC5, ATMYBCDC5 | cell division cycle 5 | chr1:3162002-3165122 FORWARD LENGTH=844 |