MLOC_43306 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.639325.532323.375724.811
LEAShoots from the seedlings (10 cm shoot stage)27.918620.787218.586221.5314
INF1Young developing inflorescences (5mm)64.171357.904256.526555.5248
INF2Developing inflorescences (1-1.5 cm)108.57887.912278.6039109.73
ROORoots from the seedlings (10 cm shoot stage)11.55624.601213.623932.1839
NODDeveloping tillers at six leaf stage, 3rd internode10.90914.531516.320754.0104
CAR5Developing grain, bracts removed (5 DPA)41.534536.075838.756141.783
CAR15Developing grain, bracts removed (15 DPA)20.268518.612720.033948.7723



CDS Structure of MLOC_43306






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_43306.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_43306.2CUST_6072_PI427708083AvailableAvailablecontig_269327 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g28090.1 +1 0.0 573 324/357 (91%) 13104.m02658 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT1G09770.1 +1 4e-167 492 285/359 (79%) | Symbols: ATCDC5, CDC5, ATMYBCDC5 | cell division cycle 5 | chr1:3162002-3165122 FORWARD LENGTH=844