MLOC_433 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.002415.29218.364431.5859
LEAShoots from the seedlings (10 cm shoot stage)9.39232.809141.835027.51569
INF1Young developing inflorescences (5mm)52.050836.832636.617870.0963
INF2Developing inflorescences (1-1.5 cm)31.017533.385430.584862.2262
ROORoots from the seedlings (10 cm shoot stage)3.158977.443597.1380118.8258
NODDeveloping tillers at six leaf stage, 3rd internode00.8779373.013193.86742
CAR5Developing grain, bracts removed (5 DPA)31.399817.018229.949243.6541
CAR15Developing grain, bracts removed (15 DPA)3.08552.425932.5454210.9842



CDS Structure of MLOC_433






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_433.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_433.1CUST_6070_PI427708083AvailableAvailablecontig_102928 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g56130.1 -2 2e-37 128 62/65 (95%) 13102.m06448 protein PCNA - Putative DNA replicative polymerase clamp, expressed
TAIR PP10 AT1G07370.1 -2 3e-35 122 58/65 (89%) | Symbols: PCNA1, ATPCNA1 | proliferating cellular nuclear antigen 1 | chr1:2263204-2264382 FORWARD LENGTH=263