MLOC_43288 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.086812.06118.285830
LEAShoots from the seedlings (10 cm shoot stage)13.27951.819286.85630
INF1Young developing inflorescences (5mm)6.314325.4341111.26640
INF2Developing inflorescences (1-1.5 cm)4.532286.851389.832350
ROORoots from the seedlings (10 cm shoot stage)22.954212.46098.512230
NODDeveloping tillers at six leaf stage, 3rd internode18.714726.787224.31950
CAR5Developing grain, bracts removed (5 DPA)0.4151154.921840.9600840
CAR15Developing grain, bracts removed (15 DPA)0.517188000



CDS Structure of MLOC_43288






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250397.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250397.1CUST_18839_PI427708080NoneNoneNone
MLOC_38983.1NoneAvailableNonecontig_2551939 (Mapped)
MLOC_42483.1NoneAvailableNonecontig_2646846 (Not mapped)
MLOC_43288.1NoneAvailableNonecontig_26914 (Mapped)
MLOC_46282.1NoneAvailableNonecontig_288020 (Not mapped)
MLOC_50401.1NoneAvailableNonecontig_35949 (Mapped)
MLOC_52798.1NoneAvailableAvailablecontig_378 (Not mapped)
MLOC_58585.1NoneAvailableNonecontig_42801 (Mapped)
MLOC_71539.1NoneAvailableNonecontig_60029 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----