MLOC_43256 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.820574.735425.37824.53456
LEAShoots from the seedlings (10 cm shoot stage)12.84714.796517.19210.6284
INF1Young developing inflorescences (5mm)6.866998.093029.358485.35961
INF2Developing inflorescences (1-1.5 cm)7.643877.549988.908127.077
ROORoots from the seedlings (10 cm shoot stage)3.413082.79143.15962.86252
NODDeveloping tillers at six leaf stage, 3rd internode5.184476.268610.183319.3244
CAR5Developing grain, bracts removed (5 DPA)5.407596.635327.481944.92808
CAR15Developing grain, bracts removed (15 DPA)1.952991.546642.685173.51014



CDS Structure of MLOC_43256






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_43256.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_43256.2CUST_12419_PI427708083AvailableAvailablecontig_268959 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g57840.2 -3 1e-25 110 85/93 (91%) 13103.m06345 protein peptidase M50, mammalian sterol-regulatory element binding protein, putative, expressed
TAIR PP10 AT5G35220.1 -3 6e-19 90 64/93 (69%) | Symbols: EGY1 | Peptidase M50 family protein | chr5:13484606-13487546 REVERSE LENGTH=548