- Predicted Gene MLOC_43249
MLOC_43249 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.07197 | 8.46266 | 6.98882 | 8.22314 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.15837 | 5.24663 | 5.92484 | 5.07833 |
| INF1 | Young developing inflorescences (5mm) | 8.93306 | 9.32476 | 9.46048 | 8.82118 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.56909 | 9.53403 | 9.13468 | 11.3544 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.06174 | 7.5844 | 8.29715 | 9.54756 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.65883 | 3.38329 | 4.22357 | 11.4599 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.64839 | 7.85305 | 7.10757 | 8.15441 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.8263 | 2.62062 | 1.96905 | 6.99027 |
CDS Structure of MLOC_43249
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_43249.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 | None | - | - | - | - | - |
| TAIR PP10 |
AT1G11780.1 |
+3 |
2e-59 |
199 |
102/175 (58%) |
oxidoreductase, 2OG-Fe(II) oxygenase family protein | chr1:3977614-3979177 REVERSE LENGTH=345 |