- Predicted Gene MLOC_43243
MLOC_43243 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.42514 | 4.20328 | 4.76029 | 5.85318 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 12.522 | 15.8235 | 17.0027 | 15.9863 |
| INF1 | Young developing inflorescences (5mm) | 4.87571 | 6.62314 | 5.73528 | 6.83501 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.38741 | 4.8435 | 4.49225 | 6.90281 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.24621 | 1.05632 | 1.5367 | 2.02028 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 9.96942 | 7.66162 | 13.5691 | 29.7777 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.23055 | 7.24132 | 6.6638 | 10.1372 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.821149 | 0.783994 | 0.562555 | 2.40376 |
CDS Structure of MLOC_43243
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_43243.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g03990.1 |
+3 |
6e-66 |
212 |
120/146 (82%) |
13103.m00405 protein signal recognition particle 43 kDa protein, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT2G47450.1 |
+3 |
1e-31 |
120 |
67/129 (52%) |
| Symbols: CAO, CPSRP43 | chloroplast signal recognition particle component (CAO) | chr2:19472781-19473902 FORWARD LENGTH=373 |