- Predicted Gene MLOC_43227
MLOC_43227 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_43227_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_43227_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.93354 | 2.45206 | 2.59405 | 2.09511 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.96453 | 1.26086 | 0.974012 | 1.02807 |
INF1 | Young developing inflorescences (5mm) | 5.62808 | 3.56358 | 4.95344 | 3.29719 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.61252 | 2.94297 | 2.99478 | 2.56838 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.6262 | 1.5206 | 1.92857 | 1.47376 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0823255 | 0.208832 | 0.330587 | 0.600011 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0304064 | 0.01376 | 0.0328016 | 0.0242749 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.631239 | 0.543615 | 0.509685 | 1.12327 |
CDS Structure of MLOC_43227
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_43227.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g07500.1 |
+1 |
1e-135 |
432 |
217/262 (83%) |
13101.m00764 protein alliin lyase precursor, putative, expressed |
TAIR PP10 |
AT4G24670.2 |
+1 |
4e-85 |
288 |
146/255 (57%) |
| Symbols: TAR2 | tryptophan aminotransferase related 2 | chr4:12727940-12730694 REVERSE LENGTH=440 |