- Predicted Gene MLOC_43199
MLOC_43199 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_43199_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_43199_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 167.328 | 154.724 | 103.305 | 166.132 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.78403 | 0.169883 | 0.0592302 | 1.12235 |
INF1 | Young developing inflorescences (5mm) | 42.6719 | 67.4614 | 34.5753 | 51.7552 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.6933 | 4.95366 | 4.64262 | 7.35238 |
ROO | Roots from the seedlings (10 cm shoot stage) | 292.731 | 302.025 | 227.001 | 402.884 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.039529 | 0 | 0.0196258 | 0.016384 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.8261 | 3.20268 | 2.32701 | 3.30879 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.21821 | 1.99042 | 4.44735 | 8.87797 |
CDS Structure of MLOC_43199
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_43199.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g40614.1 |
-2 |
2e-48 |
166 |
78/90 (87%) |
13110.m03766 protein LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed |
TAIR PP10 |
AT4G12510.1 |
-2 |
4e-32 |
120 |
57/86 (66%) |
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr4:7417414-7417803 REVERSE LENGTH=129 |