MLOC_43097 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.5613020.7508240.957011
LEAShoots from the seedlings (10 cm shoot stage)01.0123801.01441
INF1Young developing inflorescences (5mm)2.044411.857382.623962.62053
INF2Developing inflorescences (1-1.5 cm)0.4306632.011221.500752.04372
ROORoots from the seedlings (10 cm shoot stage)00.63299203.60178
NODDeveloping tillers at six leaf stage, 3rd internode0.7060.3974160.331741.20789
CAR5Developing grain, bracts removed (5 DPA)1.559142.403640.4925062.57284
CAR15Developing grain, bracts removed (15 DPA)1.826630.4278981.634273.50658



CDS Structure of MLOC_43097






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_43097.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_43097.1CUST_6038_PI427708083AvailableAvailablecontig_267688 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g52960.1 -3 3e-15 71 37/50 (74%) 13102.m06040 protein PHD-finger domain containing protein, putative, expressed
TAIR PP10None-----