- Predicted Gene MLOC_43033
MLOC_43033 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_43033_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_43033_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 7.35819 | 6.88369 | 11.8396 | 7.31523 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.59873 | 5.26092 | 8.33402 | 5.79977 |
INF1 | Young developing inflorescences (5mm) | 6.33814 | 8.2144 | 10.0885 | 6.08235 |
INF2 | Developing inflorescences (1-1.5 cm) | 13.6818 | 9.03092 | 9.03538 | 10.7969 |
ROO | Roots from the seedlings (10 cm shoot stage) | 18.6011 | 7.85582 | 7.71235 | 10.6296 |
NOD | Developing tillers at six leaf stage, 3rd internode | 11.9829 | 18.2779 | 24.2184 | 54.3365 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.6243 | 10.8287 | 9.17973 | 9.28014 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.09705 | 2.83459 | 3.12374 | 5.19963 |
CDS Structure of MLOC_43033
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_43033.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g05280.1 |
+1 |
1e-49 |
164 |
84/94 (89%) |
13105.m00547 protein zinc finger family protein, putative, expressed |
TAIR PP10 |
AT3G47990.1 |
+1 |
9e-38 |
132 |
66/91 (73%) |
| Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:17713367-17716051 REVERSE LENGTH=358 |