MLOC_43021 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains000.07225430.0408045
LEAShoots from the seedlings (10 cm shoot stage)0.1727840.18235400.140472
INF1Young developing inflorescences (5mm)00.04859530.05821350.0710003
INF2Developing inflorescences (1-1.5 cm)0.117598000.142519
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.04208230.08832150.06860820.253212
CAR5Developing grain, bracts removed (5 DPA)000.05302990.0381702
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_43021






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_43021.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_43021.1NoneAvailableAvailablecontig_267217 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g17830.1 -2 8e-24 94 49/91 (54%) 13105.m01882 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----