MLOC_42976 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.970827.755184.744254.9057
LEAShoots from the seedlings (10 cm shoot stage)34.289237.662431.932123.3892
INF1Young developing inflorescences (5mm)2.522132.921511.214081.76986
INF2Developing inflorescences (1-1.5 cm)1.42111.538212.138261.61822
ROORoots from the seedlings (10 cm shoot stage)2.424511.87991.44861.66367
NODDeveloping tillers at six leaf stage, 3rd internode10.72215.4265111.894714.6058
CAR5Developing grain, bracts removed (5 DPA)8.9113811.26798.206568.13721
CAR15Developing grain, bracts removed (15 DPA)0.6210080.4420230.4092891.17376



CDS Structure of MLOC_42976






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK375099
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375099CUST_13887_PI427708083NoneNoneNone
MLOC_21333.1NoneAvailableNonecontig_1594348 (Mapped)
MLOC_42976.1NoneAvailableAvailablecontig_266997 (Mapped)
MLOC_45774.1NoneAvailableNonecontig_281109 (Mapped)
MLOC_47718.1NoneAvailableNonecontig_310882 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----