MLOC_42959 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.582471.605042.214680
LEAShoots from the seedlings (10 cm shoot stage)1.71367000
INF1Young developing inflorescences (5mm)00.4696300
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)4.20744.565641.515680
NODDeveloping tillers at six leaf stage, 3rd internode00.078157500
CAR5Developing grain, bracts removed (5 DPA)0.466870.4258790.4685710
CAR15Developing grain, bracts removed (15 DPA)0.398227000



CDS Structure of MLOC_42959






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK362753
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362753CUST_20600_PI427708080NoneNoneNone
MLOC_11635.1NoneAvailableAvailablecontig_1561505 (Mapped)
MLOC_14893.1NoneAvailableNonecontig_156935 (Mapped)
MLOC_35571.1NoneAvailableNonecontig_250181 (Not mapped)
MLOC_42959.1NoneAvailableNonecontig_2669278 (Not mapped)
MLOC_49015.1NoneAvailableNonecontig_333840 (Mapped)
MLOC_79344.1NoneAvailableNonecontig_845354 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----