MLOC_42939 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6310350.5531720.7583110
LEAShoots from the seedlings (10 cm shoot stage)01.038200
INF1Young developing inflorescences (5mm)0.4132231.883692.771410
INF2Developing inflorescences (1-1.5 cm)5.21525.927656.054560
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.3840731.33691.188990
CAR5Developing grain, bracts removed (5 DPA)2.118942.872981.593130
CAR15Developing grain, bracts removed (15 DPA)1.9034601.418770



CDS Structure of MLOC_42939






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK354287
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354287NoneNoneNoneNone
MLOC_26192.1NoneAvailableNonecontig_1741356 (Not mapped)
MLOC_32606.1NoneAvailableNonecontig_2302266 (Not mapped)
MLOC_35944.1NoneAvailableNonecontig_2526974 (Not mapped)
MLOC_42939.1NoneAvailableNonecontig_2668676 (Not mapped)
MLOC_55863.1NoneAvailableAvailablecontig_403417 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----