- Predicted Gene MLOC_42926
MLOC_42926 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.0331 | 1.17171 | 0.432055 | 0.906584 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.09039 | 1.68804 | 2.7099 | 2.05628 |
| INF1 | Young developing inflorescences (5mm) | 6.33713 | 5.52214 | 5.83276 | 4.31276 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.82815 | 6.8712 | 6.98375 | 7.74907 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.846083 | 1.81325 | 1.99517 | 1.83141 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.76836 | 1.89465 | 2.05035 | 5.76971 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.00972 | 5.46866 | 4.67357 | 4.20964 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.951812 | 1.81971 | 1.88247 | 2.63367 |
CDS Structure of MLOC_42926
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_42926.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g30540.1 |
+2 |
2e-121 |
330 |
156/162 (96%) |
13112.m03112 protein ubiquitin carboxyl-terminal hydrolase, putative, expressed |
| TAIR PP10 |
AT5G06600.1 |
+2 |
7e-118 |
315 |
147/162 (91%) |
| Symbols: UBP12 | ubiquitin-specific protease 12 | chr5:2019545-2027834 REVERSE LENGTH=1116 |