MLOC_42925 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.654022.555910.8843510
LEAShoots from the seedlings (10 cm shoot stage)1.5619100.2683350
INF1Young developing inflorescences (5mm)3.850156.81184.534330
INF2Developing inflorescences (1-1.5 cm)3.225982.856411.948440
ROORoots from the seedlings (10 cm shoot stage)1.945861.339872.092530
NODDeveloping tillers at six leaf stage, 3rd internode0.106397000
CAR5Developing grain, bracts removed (5 DPA)0.277590.2603740.6930110
CAR15Developing grain, bracts removed (15 DPA)0.108197000



CDS Structure of MLOC_42925






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374828
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374828CUST_22726_PI427708080NoneNoneNone
MLOC_42925.1NoneAvailableNonecontig_2668314 (Mapped)
MLOC_70315.1NoneAvailableAvailablecontig_57760 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----