MLOC_42911 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.118216.470365.965046.28171
LEAShoots from the seedlings (10 cm shoot stage)82.173572.432964.400870.8017
INF1Young developing inflorescences (5mm)1.864310.6180990.6326710.944612
INF2Developing inflorescences (1-1.5 cm)0.4198130.5028090.7308860.639689
ROORoots from the seedlings (10 cm shoot stage)0.02933140.2235050.4815510.333629
NODDeveloping tillers at six leaf stage, 3rd internode5.733014.885745.5695120.3009
CAR5Developing grain, bracts removed (5 DPA)26.480224.488826.000827.8573
CAR15Developing grain, bracts removed (15 DPA)0.5471080.7190350.6374771.55433



CDS Structure of MLOC_42911






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK360855
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360855CUST_20279_PI427708080NoneNoneNone
MLOC_24985.1NoneAvailableNonecontig_166468 (Mapped)
MLOC_27533.1NoneAvailableNonecontig_184007 (Mapped)
MLOC_35418.1NoneAvailableNonecontig_248292 (Mapped)
MLOC_42911.1NoneAvailableAvailablecontig_266778 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----