MLOC_42888 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.289989.245637.730590
LEAShoots from the seedlings (10 cm shoot stage)3.053280.7555120.2935980
INF1Young developing inflorescences (5mm)32.62131.796429.85550
INF2Developing inflorescences (1-1.5 cm)36.544235.053732.44990
ROORoots from the seedlings (10 cm shoot stage)02.957550.723830
NODDeveloping tillers at six leaf stage, 3rd internode0.3695340.7381081.606220
CAR5Developing grain, bracts removed (5 DPA)6.619910.37828.104560
CAR15Developing grain, bracts removed (15 DPA)2.777021.762341.923990



CDS Structure of MLOC_42888






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK370249
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370249CUST_21918_PI427708080NoneNoneNone
MLOC_36692.2NoneAvailableAvailablecontig_2547195 (Not mapped)
MLOC_42888.1NoneAvailableNonecontig_266729 (Mapped)
MLOC_66473.1NoneAvailableNonecontig_51606 (Mapped)
MLOC_67714.1NoneAvailableNonecontig_53501 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----