MLOC_42878 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.3951115.999817.671610.7306
LEAShoots from the seedlings (10 cm shoot stage)647.0831049.54976.577634.8
INF1Young developing inflorescences (5mm)11.46485.661797.134136.34975
INF2Developing inflorescences (1-1.5 cm)8.527626.521247.405887.49331
ROORoots from the seedlings (10 cm shoot stage)2.509877.0768238.47989.62509
NODDeveloping tillers at six leaf stage, 3rd internode1947.47972.7271409.582698.44
CAR5Developing grain, bracts removed (5 DPA)108.167120.597122.103102.572
CAR15Developing grain, bracts removed (15 DPA)7.3386711.09787.9843317.886



CDS Structure of MLOC_42878






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK253131.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK253131.1CUST_23592_PI427708080NoneNoneNone
MLOC_42878.1NoneAvailableAvailablecontig_266699 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----