MLOC_42871 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.979273.219292.04422.40502
LEAShoots from the seedlings (10 cm shoot stage)6.077132.178263.431043.10683
INF1Young developing inflorescences (5mm)2.396714.730734.938813.15592
INF2Developing inflorescences (1-1.5 cm)6.103372.944744.914294.89271
ROORoots from the seedlings (10 cm shoot stage)0.582323.26912.569482.83422
NODDeveloping tillers at six leaf stage, 3rd internode3.578583.824394.3547510.8231
CAR5Developing grain, bracts removed (5 DPA)2.110514.370146.04693.91207
CAR15Developing grain, bracts removed (15 DPA)2.243621.097952.161934.17793



CDS Structure of MLOC_42871






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_42871.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_42871.1CUST_5998_PI427708083AvailableAvailablecontig_2666733 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----