MLOC_42837 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4213981.205281.58950
LEAShoots from the seedlings (10 cm shoot stage)6.334746.831424.416880
INF1Young developing inflorescences (5mm)1.477550.5124863.190490
INF2Developing inflorescences (1-1.5 cm)1.452851.660942.054770
ROORoots from the seedlings (10 cm shoot stage)00.2842170.9117250
NODDeveloping tillers at six leaf stage, 3rd internode1.891721.127922.511950
CAR5Developing grain, bracts removed (5 DPA)1.546640.9094451.925830
CAR15Developing grain, bracts removed (15 DPA)0.5821670.383370.3677030



CDS Structure of MLOC_42837






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK366903
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366903CUST_21375_PI427708080NoneNoneNone
MLOC_33238.1NoneAvailableNonecontig_235601 (Mapped)
MLOC_42837.1NoneAvailableNonecontig_2665223 (Not mapped)
MLOC_49064.1NoneAvailableNonecontig_334785 (Mapped)
MLOC_73778.2NoneAvailableAvailablecontig_64382 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----