MLOC_42815 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.37719.258827.239928.30828
LEAShoots from the seedlings (10 cm shoot stage)5.878471.293293.029563.40883
INF1Young developing inflorescences (5mm)5.449843.318644.64263.6349
INF2Developing inflorescences (1-1.5 cm)2.499253.21372.860893.03853
ROORoots from the seedlings (10 cm shoot stage)9.605043.658463.058165.7915
NODDeveloping tillers at six leaf stage, 3rd internode21.764421.837224.909965.1393
CAR5Developing grain, bracts removed (5 DPA)4.787464.85646.190395.26572
CAR15Developing grain, bracts removed (15 DPA)0.8219880.8761240.26632.12498



CDS Structure of MLOC_42815






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_42815.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_42815.1CUST_12402_PI427708083AvailableAvailablecontig_2664388 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g34170.3 -1 1e-22 97 44/44 (100%) 13105.m03548 protein tubulin/FtsZ domain containing protein, putative, expressed
TAIR PP10 AT4G20890.1 -1 8e-23 97 44/44 (100%) | Symbols: TUB9 | tubulin beta-9 chain | chr4:11182218-11183840 FORWARD LENGTH=444