MLOC_42794 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains01.102353.560060
LEAShoots from the seedlings (10 cm shoot stage)02.0899500
INF1Young developing inflorescences (5mm)2.252921.1494110.17570
INF2Developing inflorescences (1-1.5 cm)3.962217.357965.452420
ROORoots from the seedlings (10 cm shoot stage)2.277482.267653.958270
NODDeveloping tillers at six leaf stage, 3rd internode01.309713.207310
CAR5Developing grain, bracts removed (5 DPA)2.14161.857564.722460
CAR15Developing grain, bracts removed (15 DPA)1.12293000



CDS Structure of MLOC_42794






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK359213
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359213CUST_20069_PI427708080NoneNoneNone
MLOC_21803.2NoneAvailableAvailablecontig_159898 (Mapped)
MLOC_26950.1NoneAvailableNonecontig_1792447 (Not mapped)
MLOC_27510.1NoneAvailableNonecontig_18380 (Mapped)
MLOC_30478.1NoneAvailableNonecontig_210179 (Mapped)
MLOC_31678.1NoneAvailableNonecontig_221252 (Mapped)
MLOC_41934.1NoneAvailableNonecontig_2614634 (Not mapped)
MLOC_42794.1NoneAvailableNonecontig_2663257 (Not mapped)
MLOC_47814.1NoneAvailableNonecontig_312563 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----