MLOC_42780 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.107181.645053.731194.41259
LEAShoots from the seedlings (10 cm shoot stage)002.078662.04964
INF1Young developing inflorescences (5mm)0.7944430.92692201.83871
INF2Developing inflorescences (1-1.5 cm)0.8574512.897451.054442.82444
ROORoots from the seedlings (10 cm shoot stage)2.339481.8355903.61956
NODDeveloping tillers at six leaf stage, 3rd internode0.7342025.038311.8178818.6024
CAR5Developing grain, bracts removed (5 DPA)3.081892.890512.563984.46478
CAR15Developing grain, bracts removed (15 DPA)00.4988930.6620222.0667



CDS Structure of MLOC_42780






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_42780.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_42780.1CUST_3737_PI427708086AvailableAvailablecontig_26624 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----