MLOC_42730 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains34.656530.506239.163942.4611
LEAShoots from the seedlings (10 cm shoot stage)32.547119.80614.341922.0883
INF1Young developing inflorescences (5mm)59.959759.907873.852768.3035
INF2Developing inflorescences (1-1.5 cm)97.529266.14867.3731102.749
ROORoots from the seedlings (10 cm shoot stage)24.932521.086339.407737.1416
NODDeveloping tillers at six leaf stage, 3rd internode33.469116.624114.165266.6899
CAR5Developing grain, bracts removed (5 DPA)28.997727.867334.647437.6751
CAR15Developing grain, bracts removed (15 DPA)16.749620.961422.338857.7487



CDS Structure of MLOC_42730






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_42730.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_42730.1CUST_5722_PI427708100AvailableAvailablecontig_2660343 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----