MLOC_42655 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.353593.633353.16930
LEAShoots from the seedlings (10 cm shoot stage)3.286192.720730.9705990
INF1Young developing inflorescences (5mm)5.785736.904017.488160
INF2Developing inflorescences (1-1.5 cm)13.338810.508914.85730
ROORoots from the seedlings (10 cm shoot stage)2.388742.828763.091490
NODDeveloping tillers at six leaf stage, 3rd internode4.58533.840376.156730
CAR5Developing grain, bracts removed (5 DPA)7.535647.303178.254360
CAR15Developing grain, bracts removed (15 DPA)4.857564.813634.357730



CDS Structure of MLOC_42655






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK365584
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365584CUST_13726_PI427708083NoneNoneNone
MLOC_27178.1NoneAvailableNonecontig_181189 (Mapped)
MLOC_31723.1NoneAvailableNonecontig_2217212 (Not mapped)
MLOC_41995.1NoneAvailableNonecontig_261739 (Mapped)
MLOC_42655.1NoneAvailableNonecontig_265668 (Not mapped)
MLOC_886.1NoneAvailableAvailablecontig_107242 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----