MLOC_42646 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.32711700
LEAShoots from the seedlings (10 cm shoot stage)0.4981211.2360900
INF1Young developing inflorescences (5mm)0.9824512.255231.309070
INF2Developing inflorescences (1-1.5 cm)1.665170.948922.010690
ROORoots from the seedlings (10 cm shoot stage)0.6619380.36975700
NODDeveloping tillers at six leaf stage, 3rd internode00.4658810.7488680
CAR5Developing grain, bracts removed (5 DPA)0.2990471.376951.217050
CAR15Developing grain, bracts removed (15 DPA)0.5390491.513970.3851280



CDS Structure of MLOC_42646






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369875
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369875CUST_25387_PI427708080NoneNoneNone
MLOC_1648.1NoneAvailableNonecontig_1145962 (Not mapped)
MLOC_1974.1NoneAvailableAvailablecontig_117571 (Mapped)
MLOC_25022.1NoneAvailableNonecontig_166666 (Mapped)
MLOC_25024.1NoneAvailableNonecontig_166666 (Mapped)
MLOC_25919.1NoneAvailableNonecontig_1721789 (Mapped)
MLOC_29187.1NoneAvailableNonecontig_1983382 (Mapped)
MLOC_29861.1NoneAvailableNonecontig_2043605 (Not mapped)
MLOC_34779.1NoneAvailableNonecontig_2445668 (Not mapped)
MLOC_36273.1NoneAvailableNonecontig_2543495 (Not mapped)
MLOC_37299.1NoneAvailableNonecontig_2548130 (Mapped)
MLOC_42646.1NoneAvailableNonecontig_2655842 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----