MLOC_42645 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6932430.62984300
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)2.768930.7824472.577870
INF2Developing inflorescences (1-1.5 cm)5.90337.699032.059240
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode1.147730.855922.827580
CAR5Developing grain, bracts removed (5 DPA)0.3099620.2865020.2838940
CAR15Developing grain, bracts removed (15 DPA)00.231070.299660



CDS Structure of MLOC_42645






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK353818
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353818CUST_23619_PI427708080NoneNoneNone
MLOC_33076.1NoneAvailableNonecontig_2342838 (Not mapped)
MLOC_42194.1NoneAvailableNonecontig_2629986 (Not mapped)
MLOC_42645.1NoneAvailableNonecontig_2655803 (Not mapped)
MLOC_45441.1NoneAvailableAvailablecontig_277971 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----