MLOC_42619 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.130217.89914.47920
LEAShoots from the seedlings (10 cm shoot stage)8.256861.545182.464430
INF1Young developing inflorescences (5mm)6.268348.586728.35320
INF2Developing inflorescences (1-1.5 cm)6.252494.415546.933330
ROORoots from the seedlings (10 cm shoot stage)6.266386.990673.026040
NODDeveloping tillers at six leaf stage, 3rd internode17.847118.18749.086660
CAR5Developing grain, bracts removed (5 DPA)1.37170.9698492.368650
CAR15Developing grain, bracts removed (15 DPA)0.557611000



CDS Structure of MLOC_42619






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK365693
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365693CUST_21142_PI427708080NoneNoneNone
MLOC_42619.1NoneAvailableNonecontig_2654155 (Not mapped)
MLOC_51194.1NoneAvailableNonecontig_368681 (Mapped)
MLOC_6589.1NoneAvailableAvailablecontig_137763 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----