MLOC_42616 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.202811.812611.41560
LEAShoots from the seedlings (10 cm shoot stage)5.929315.666579.435990
INF1Young developing inflorescences (5mm)15.83213.16915.04560
INF2Developing inflorescences (1-1.5 cm)23.195225.179938.9020
ROORoots from the seedlings (10 cm shoot stage)9.981967.6167811.61510
NODDeveloping tillers at six leaf stage, 3rd internode4.858067.958711.40790
CAR5Developing grain, bracts removed (5 DPA)26.222314.623128.29860
CAR15Developing grain, bracts removed (15 DPA)20.709416.334817.98130



CDS Structure of MLOC_42616






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK375286
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375286CUST_25964_PI427708080NoneNoneNone
MLOC_42616.1NoneAvailableNonecontig_2654087 (Not mapped)
MLOC_64752.1NoneAvailableAvailablecontig_49277 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----