MLOC_42577 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains22.257337.013336.95970
LEAShoots from the seedlings (10 cm shoot stage)47.124140.182535.99150
INF1Young developing inflorescences (5mm)71.305185.6377103.8640
INF2Developing inflorescences (1-1.5 cm)119.106106.869105.9560
ROORoots from the seedlings (10 cm shoot stage)6.6847732.629828.95820
NODDeveloping tillers at six leaf stage, 3rd internode25.933432.133736.28630
CAR5Developing grain, bracts removed (5 DPA)58.614857.583857.66230
CAR15Developing grain, bracts removed (15 DPA)21.179417.293623.88210



CDS Structure of MLOC_42577






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK375595
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375595NoneNoneNoneNone
MLOC_25955.1NoneAvailableNonecontig_1724250 (Not mapped)
MLOC_26084.1NoneAvailableNonecontig_1734180 (Not mapped)
MLOC_27249.1NoneAvailableNonecontig_1816770 (Not mapped)
MLOC_27778.1NoneAvailableNonecontig_1862097 (Not mapped)
MLOC_29259.1NoneAvailableNonecontig_1988447 (Not mapped)
MLOC_30532.1NoneAvailableNonecontig_2105795 (Not mapped)
MLOC_30962.1NoneAvailableNonecontig_2143837 (Not mapped)
MLOC_35046.1NoneAvailableNonecontig_2454064 (Not mapped)
MLOC_362.1NoneAvailableNonecontig_1025514 (Not mapped)
MLOC_42577.1NoneAvailableNonecontig_265229 (Mapped)
MLOC_42770.1NoneAvailableNonecontig_2661814 (Not mapped)
MLOC_42787.1NoneAvailableNonecontig_2662653 (Not mapped)
MLOC_509.1NoneAvailableNonecontig_1035800 (Not mapped)
MLOC_51947.1NoneAvailableAvailablecontig_371749 (Mapped)
MLOC_58986.1NoneAvailableNonecontig_431788 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----