MLOC_4257 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 24.6938 | 24.8212 | 20.8293 | 24.9132 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 50.2503 | 40.9675 | 38.1784 | 38.0933 |
| INF1 | Young developing inflorescences (5mm) | 23.0664 | 19.8477 | 20.6383 | 18.5549 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.5054 | 15.4467 | 16.2254 | 17.1393 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 10.1241 | 10.9625 | 13.5024 | 14.0338 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 11.4805 | 15.5382 | 24.1102 | 58.2718 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 19.2074 | 18.7935 | 19.2323 | 19.1929 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.18691 | 3.90417 | 4.73266 | 9.9141 |
CDS Structure of MLOC_4257
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4257.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g51450.1 |
-2 |
0.0 |
582 |
313/355 (88%) |
13105.m05548 protein OsClp8 - Putative Clp protease homologue, expressed |
| TAIR PP10 |
AT1G49970.1 |
-2 |
2e-112 |
342 |
191/326 (59%) |
| Symbols: CLPR1, NCLPP5, SVR2 | CLP protease proteolytic subunit 1 | chr1:18501936-18504462 REVERSE LENGTH=387 |
