MLOC_42560 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.519186.145485.198680
LEAShoots from the seedlings (10 cm shoot stage)9.18676.66989.123840
INF1Young developing inflorescences (5mm)4.096497.509978.174510
INF2Developing inflorescences (1-1.5 cm)7.29217.36575.744140
ROORoots from the seedlings (10 cm shoot stage)11.36078.049245.610130
NODDeveloping tillers at six leaf stage, 3rd internode12.772325.635847.44280
CAR5Developing grain, bracts removed (5 DPA)7.524448.342056.093150
CAR15Developing grain, bracts removed (15 DPA)2.396894.638474.681320



CDS Structure of MLOC_42560






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364353
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364353CUST_24766_PI427708080NoneNoneNone
MLOC_26911.7NoneAvailableAvailablecontig_178929 (Mapped)
MLOC_42560.1NoneAvailableNonecontig_265156 (Mapped)
MLOC_48691.1NoneAvailableNonecontig_328054 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----