MLOC_42559 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.5376613.354116.11480
LEAShoots from the seedlings (10 cm shoot stage)6.018011.651543.904380
INF1Young developing inflorescences (5mm)17.904313.310417.03630
INF2Developing inflorescences (1-1.5 cm)14.173312.629619.7080
ROORoots from the seedlings (10 cm shoot stage)4.064756.097715.771940
NODDeveloping tillers at six leaf stage, 3rd internode7.272761.561773.825110
CAR5Developing grain, bracts removed (5 DPA)25.900523.008123.57160
CAR15Developing grain, bracts removed (15 DPA)3.812774.096283.2870



CDS Structure of MLOC_42559






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK361409
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361409CUST_20366_PI427708080NoneNoneNone
MLOC_42559.1NoneAvailableNonecontig_2651528 (Not mapped)
MLOC_47405.1NoneAvailableNonecontig_305504 (Mapped)
MLOC_70800.1NoneAvailableAvailablecontig_58562 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----