MLOC_42558 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.595134.761194.712956.8714
LEAShoots from the seedlings (10 cm shoot stage)6.464042.439513.333624.20971
INF1Young developing inflorescences (5mm)6.540337.746617.887139.47377
INF2Developing inflorescences (1-1.5 cm)7.9384112.57428.4957716.7731
ROORoots from the seedlings (10 cm shoot stage)3.875095.538514.9124410.0449
NODDeveloping tillers at six leaf stage, 3rd internode8.307468.026344.9779831.7137
CAR5Developing grain, bracts removed (5 DPA)8.604837.650985.906210.5135
CAR15Developing grain, bracts removed (15 DPA)1.949412.361932.346927.69757



CDS Structure of MLOC_42558






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_42558.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_42558.1CUST_5687_PI427708100AvailableAvailablecontig_26515 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----