MLOC_42545 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.234667.558095.731610
LEAShoots from the seedlings (10 cm shoot stage)13.444410.002517.6070
INF1Young developing inflorescences (5mm)7.161358.07676.915250
INF2Developing inflorescences (1-1.5 cm)7.909148.491727.021430
ROORoots from the seedlings (10 cm shoot stage)14.10087.930038.287470
NODDeveloping tillers at six leaf stage, 3rd internode6.999589.810017.451290
CAR5Developing grain, bracts removed (5 DPA)9.954926.914377.241570
CAR15Developing grain, bracts removed (15 DPA)4.342072.76942.610010



CDS Structure of MLOC_42545






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK249174.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249174.1CUST_12329_PI427708100NoneNoneNone
MLOC_29303.2NoneAvailableAvailablecontig_1993610 (Not mapped)
MLOC_35302.1NoneAvailableNonecontig_2472183 (Not mapped)
MLOC_42545.1NoneAvailableNonecontig_2650682 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----