- Predicted Gene MLOC_42516
MLOC_42516 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 90.816 | 65.1909 | 111.307 | 82.3763 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 52.8767 | 14.5532 | 17.0874 | 22.1947 |
| INF1 | Young developing inflorescences (5mm) | 56.264 | 65.6505 | 54.6212 | 53.6456 |
| INF2 | Developing inflorescences (1-1.5 cm) | 49.5899 | 52.3493 | 52.8914 | 61.5531 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 37.413 | 38.5503 | 37.1091 | 42.8341 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 35.9742 | 16.2806 | 19.5364 | 41.6801 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 121.103 | 105.655 | 128.012 | 125.965 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 15.7276 | 13.9563 | 19.4189 | 38.7828 |
CDS Structure of MLOC_42516
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_42516.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g73790.1 |
-2 |
2e-38 |
134 |
66/77 (86%) |
13101.m08055 protein NAD dependent epimerase/dehydratase family protein, putative, expressed |
| TAIR PP10 |
AT1G08200.1 |
-2 |
2e-33 |
119 |
58/78 (74%) |
| Symbols: AXS2 | UDP-D-apiose/UDP-D-xylose synthase 2 | chr1:2574259-2576609 REVERSE LENGTH=389 |