MLOC_42490 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.37668400
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)00.63062700
INF2Developing inflorescences (1-1.5 cm)0.30799100.3513170
ROORoots from the seedlings (10 cm shoot stage)01.2549200
NODDeveloping tillers at six leaf stage, 3rd internode00.12425600
CAR5Developing grain, bracts removed (5 DPA)1.079862.686865.766010
CAR15Developing grain, bracts removed (15 DPA)00.2801590.3611820



CDS Structure of MLOC_42490






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK375303
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375303CUST_22814_PI427708080NoneNoneNone
MLOC_149.1NoneAvailableAvailablecontig_10094 (Mapped)
MLOC_40362.1NoneAvailableNonecontig_2558710 (Mapped)
MLOC_42490.1NoneAvailableNonecontig_26471 (Not mapped)
MLOC_46283.1NoneAvailableNonecontig_288054 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----