MLOC_42486 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)1.1392000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.3068920.5420780
CAR5Developing grain, bracts removed (5 DPA)00.65449800
CAR15Developing grain, bracts removed (15 DPA)0.680668000



CDS Structure of MLOC_42486






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK358163
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358163CUST_24091_PI427708080NoneNoneNone
MLOC_31282.1NoneAvailableNonecontig_2173574 (Not mapped)
MLOC_32689.1NoneAvailableNonecontig_2310859 (Not mapped)
MLOC_41021.1NoneAvailableNonecontig_2569066 (Not mapped)
MLOC_42486.1NoneAvailableNonecontig_2646975 (Not mapped)
MLOC_61342.1NoneAvailableAvailablecontig_45400 (Mapped)
MLOC_64356.1NoneAvailableNonecontig_487052 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----