MLOC_42483 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.224666.0518100
LEAShoots from the seedlings (10 cm shoot stage)3.652093.7822900
INF1Young developing inflorescences (5mm)3.685471.0060800
INF2Developing inflorescences (1-1.5 cm)2.0285700.978480
ROORoots from the seedlings (10 cm shoot stage)7.108815.7808700
NODDeveloping tillers at six leaf stage, 3rd internode7.951537.221336.962950
CAR5Developing grain, bracts removed (5 DPA)0.998667000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_42483






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250397.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250397.1CUST_18839_PI427708080NoneNoneNone
MLOC_38983.1NoneAvailableNonecontig_2551939 (Mapped)
MLOC_42483.1NoneAvailableNonecontig_2646846 (Not mapped)
MLOC_43288.1NoneAvailableNonecontig_26914 (Mapped)
MLOC_46282.1NoneAvailableNonecontig_288020 (Not mapped)
MLOC_50401.1NoneAvailableNonecontig_35949 (Mapped)
MLOC_52798.1NoneAvailableAvailablecontig_378 (Not mapped)
MLOC_58585.1NoneAvailableNonecontig_42801 (Mapped)
MLOC_71539.1NoneAvailableNonecontig_60029 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----