MLOC_42482 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0011.67520
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)3.9244106.357760
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)32.03394.926048.306850
NODDeveloping tillers at six leaf stage, 3rd internode00.7361311.201970
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_42482






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_42482.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_42482.1CUST_5925_PI427708083AvailableNonecontig_2646846 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g40555.1 -3 3e-13 63 29/34 (85%) 13110.m19358 protein expressed protein
TAIR PP10None-----