- Predicted Gene MLOC_42465
MLOC_42465 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.18989 | 3.52563 | 2.5814 | 3.03355 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.99994 | 2.63389 | 2.7799 | 2.02006 |
| INF1 | Young developing inflorescences (5mm) | 4.67646 | 4.79427 | 4.04268 | 3.88531 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.88635 | 4.06111 | 3.35913 | 4.25005 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.36032 | 2.74221 | 2.80085 | 2.90464 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.18411 | 1.10946 | 2.29317 | 3.80293 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.37344 | 6.15254 | 5.11976 | 5.51125 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.53834 | 1.56763 | 0.966356 | 3.47558 |
CDS Structure of MLOC_42465
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_42465.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g28060.1 |
+3 |
8e-79 |
252 |
142/206 (69%) |
13104.m02656 protein expressed protein |
| TAIR PP10 |
AT2G43110.1 |
+3 |
1e-35 |
135 |
75/202 (37%) |
unknown protein; Has 212 Blast hits to 211 proteins in 96 species: Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 91; Plants - 31; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). | chr2:17922067-17924291 FORWARD LENGTH=288 |