MLOC_42453 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.558064.244813.19290
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)7.692614.201700
INF2Developing inflorescences (1-1.5 cm)03.2632400
ROORoots from the seedlings (10 cm shoot stage)9.148654.4584200
NODDeveloping tillers at six leaf stage, 3rd internode3.514685.703681.250660
CAR5Developing grain, bracts removed (5 DPA)4.2918108.661970
CAR15Developing grain, bracts removed (15 DPA)08.3231100



CDS Structure of MLOC_42453






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK251112.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251112.1CUST_13574_PI427708083NoneNoneNone
MLOC_1157.1NoneAvailableNonecontig_10988 (Mapped)
MLOC_16649.1NoneAvailableNonecontig_1574075 (Mapped)
MLOC_25366.1NoneAvailableNonecontig_16873 (Not mapped)
MLOC_26501.1NoneAvailableAvailablecontig_176107 (Mapped)
MLOC_30261.1NoneAvailableNonecontig_2078155 (Not mapped)
MLOC_42453.1NoneAvailableNonecontig_2645461 (Not mapped)
MLOC_49714.1NoneAvailableNonecontig_346785 (Not mapped)
MLOC_49769.1NoneAvailableNonecontig_348054 (Not mapped)
MLOC_54307.1NoneAvailableNonecontig_390402 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----