MLOC_42427 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2621070.9050281.217231.41048
LEAShoots from the seedlings (10 cm shoot stage)0.696941000.514995
INF1Young developing inflorescences (5mm)1.196670.1943370.2185790.675728
INF2Developing inflorescences (1-1.5 cm)0.5562071.050021.092921.77453
ROORoots from the seedlings (10 cm shoot stage)0.97019500.5916550.608641
NODDeveloping tillers at six leaf stage, 3rd internode1.329480.2484320.6176721.41704
CAR5Developing grain, bracts removed (5 DPA)1.09190.4115830.4222861.53793
CAR15Developing grain, bracts removed (15 DPA)0.31966000.553948



CDS Structure of MLOC_42427






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_42427.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_42427.1CUST_5921_PI427708083AvailableAvailablecontig_2643673 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g58880.1 -3 2e-15 72 39/47 (83%) 13104.m06204 protein exo70 exocyst complex subunit, putative, expressed
TAIR PP10None-----