- Predicted Gene MLOC_42413
MLOC_42413 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_42413_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_42413_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.02244 | 2.2769 | 2.79753 | 2.057 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.75464 | 3.83546 | 3.10472 | 2.63077 |
INF1 | Young developing inflorescences (5mm) | 3.71196 | 4.75279 | 6.65766 | 3.31908 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.86246 | 7.11415 | 6.98538 | 7.16297 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.01713 | 6.54509 | 3.47019 | 5.51382 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.88461 | 5.42567 | 5.75797 | 14.8975 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.12169 | 4.23481 | 7.12827 | 4.74127 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.38645 | 1.88056 | 1.54018 | 5.13033 |
CDS Structure of MLOC_42413
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_42413.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g03990.1 |
+1 |
2e-18 |
82 |
39/48 (81%) |
13106.m00345 protein aminotransferase, classes I and II, domain containing protein, expressed |
TAIR PP10 |
AT5G51690.1 |
+1 |
5e-14 |
69 |
29/50 (58%) |
| Symbols: ACS12 | 1-amino-cyclopropane-1-carboxylate synthase 12 | chr5:20999015-21000957 REVERSE LENGTH=495 |