MLOC_42352 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains174.407261.964217.194249.54
LEAShoots from the seedlings (10 cm shoot stage)91.109544.607231.443345.3756
INF1Young developing inflorescences (5mm)226.946173.36160.24173.324
INF2Developing inflorescences (1-1.5 cm)133.76112.335105.448141.868
ROORoots from the seedlings (10 cm shoot stage)89.29491.5234150.783119.571
NODDeveloping tillers at six leaf stage, 3rd internode45.492516.473315.764140.7762
CAR5Developing grain, bracts removed (5 DPA)94.323199.3849116.302111.908
CAR15Developing grain, bracts removed (15 DPA)12.06978.7725911.227326.6054



CDS Structure of MLOC_42352






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_42352.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_42352.1CUST_12393_PI427708083AvailableAvailablecontig_2638984 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----