MLOC_42349 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.624426.01823.917811.7132
LEAShoots from the seedlings (10 cm shoot stage)23.303613.972320.021110.1276
INF1Young developing inflorescences (5mm)46.266741.659547.283821.6557
INF2Developing inflorescences (1-1.5 cm)50.311549.817333.801533.807
ROORoots from the seedlings (10 cm shoot stage)20.767716.77777.5576111.9567
NODDeveloping tillers at six leaf stage, 3rd internode8.389469.890849.6283119.002
CAR5Developing grain, bracts removed (5 DPA)30.239929.269733.304518.9075
CAR15Developing grain, bracts removed (15 DPA)16.1514.763213.715321.9092



CDS Structure of MLOC_42349






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_42349.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_42349.1CUST_5907_PI427708083AvailableAvailablecontig_263877 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g13130.3 -3 7e-11 61 28/36 (78%) 13102.m01456 protein KH domain-containing protein, putative, expressed
TAIR PP10None-----